PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.3G269500.3.p
Common NamePRUPE_ppa014004mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 92aa    MW: 10364.7 Da    PI: 8.5173
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.3G269500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH22.62e-0721571854
                        HHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
                 HLH 18 safeeLrellPk.askapskKlsKaeiLekAveYIksL 54
                        +  ++Lr+l+P+ +   +s K+s + +L++++ YI++L
  Prupe.3G269500.3.p 21 ELVSKLRQLVPEiR-DRRSDKVSASKVLQETCSYIRNL 57
                        56689*******76.99*******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.036357IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.3E-81873IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474596.94E-91976IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000107.5E-52157IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MSSRRSRQSG TPTIKDDQII ELVSKLRQLV PEIRDRRSDK VSASKVLQET CSYIRNLHRE  60
VDDLSERLSQ LLSTIDADSP EAAIIRSLIT Q*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Ppe.204341e-151fruit
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008230751.11e-57PREDICTED: transcription factor PRE6-like
RefseqXP_007215199.11e-57hypothetical protein PRUPE_ppa014004mg
RefseqXP_007215198.11e-57hypothetical protein PRUPE_ppa014004mg
SwissprotQ9LJX14e-40PRE5_ARATH; Transcription factor PRE5
TrEMBLM5X4F01e-57M5X4F0_PRUPE; Uncharacterized protein
STRINGPOPTR_0017s11760.15e-47(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28857.12e-41bHLH family protein